All functions

alpha.bags()

Create alpha bags

AoD(<biplot>)

Calculate elements for the Analysis of Distance (AoD) biplot

AoD()

Use the Analysis of Distance (AoD) method to construct the biplot

axes()

Format aesthetics for the biplot axes

axes_coordinates()

Calibrate Biplot Axes

biplot()

First step to create a new biplot with biplotEZ

biplotEZ

biplotEZ: EZ-to-Use Biplots

CA(<biplot>)

CA biplot

CA()

Correspondence Analysis (CA) method

CATPCA()

Categorical Principal Component Analysis

classification(<biplot>)

classification biplot

classification()

Classification biplot method

classify()

Classify samples into classes

CLPs()

Format aesthetics for the category level points

CLRs()

Format aesthetics for the category level regions

CVA(<biplot>)

Calculate elements for the CVA biplot

CVA()

Perform Canonical Variate Analysis (CVA)

CVAlowdim()

Construct additional dimensions when the dimension of the canonical space is smaller than the dimension of the biplot

density1D()

Creates a kernel density in 1-dimension

density2D()

Create a density in 2-dimensions

ellipses()

Concentration ellipses (\(\kappa\)-ellipses)

extended.matching.coefficient()

Extended matching coefficient

fit.measures()

Compute measures of fit for the biplot.

interpolate()

Interpolate supplementary points and variables to add to the biplot

legend.type()

Format the legend for the biplot

means()

Format aesthetics for the class or group means

newaxes()

Format aesthetics for the supplementary (new) biplot axes

newsamples()

Format aesthetics for the supplementary (new) biplot samples

PCA(<biplot>)

Calculate elements for the PCA biplot

PCA()

Perform Principal Components Analysis (PCA)

PCO(<biplot>)

PCO biplot

PCO()

Principal Coordinate Analysis (PCO) biplot method

plot(<biplot>)

Generic Plotting function of objects of class biplot

prediction()

Predict samples to display on the biplot

print(<biplot>)

Generic print function for objects of class biplot

reflect()

Reflect the biplot about a chosen axis

regress(<biplot>)

Regression biplot

regress()

Regression biplot method

rotate()

Rotate the biplot a chosen amount of degrees

samples()

Format aesthetics for the biplot samples

sqrtManhattan()

Computes the square root of the Manhattan distance An example of a Euclidean embeddable distance metric

summary(<biplot>)

Generic summary function for objects of class biplot

translate_axes()

Translate biplot axes