
Package index
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alpha.bags()
- Create alpha bags
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AoD(<biplot>)
- Calculate elements for the Analysis of Distance (AoD) biplot
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AoD()
- Use the Analysis of Distance (AoD) method to construct the biplot
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axes()
- Format aesthetics for the biplot axes
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axes_coordinates()
- Calibrate Biplot Axes
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biplot()
- First step to create a new biplot with biplotEZ
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biplotEZ
- biplotEZ: EZ-to-Use Biplots
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CA(<biplot>)
- CA biplot
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CA()
- Correspondence Analysis (CA) method
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CATPCA()
- Categorical Principal Component Analysis
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classification(<biplot>)
- classification biplot
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classification()
- Classification biplot method
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classify()
- Classify samples into classes
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CLPs()
- Format aesthetics for the category level points
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CLRs()
- Format aesthetics for the category level regions
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CVA(<biplot>)
- Calculate elements for the CVA biplot
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CVA()
- Perform Canonical Variate Analysis (CVA)
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CVAlowdim()
- Construct additional dimensions when the dimension of the canonical space is smaller than the dimension of the biplot
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density1D()
- Creates a kernel density in 1-dimension
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density2D()
- Create a density in 2-dimensions
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ellipses()
- Concentration ellipses (\(\kappa\)-ellipses)
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extended.matching.coefficient()
- Extended matching coefficient
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fit.measures()
- Compute measures of fit for the biplot.
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interpolate()
- Interpolate supplementary points and variables to add to the biplot
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legend.type()
- Format the legend for the biplot
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means()
- Format aesthetics for the class or group means
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newaxes()
- Format aesthetics for the supplementary (new) biplot axes
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newsamples()
- Format aesthetics for the supplementary (new) biplot samples
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PCA(<biplot>)
- Calculate elements for the PCA biplot
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PCA()
- Perform Principal Components Analysis (PCA)
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PCO(<biplot>)
- PCO biplot
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PCO()
- Principal Coordinate Analysis (PCO) biplot method
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plot(<biplot>)
- Generic Plotting function of objects of class biplot
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prediction()
- Predict samples to display on the biplot
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print(<biplot>)
- Generic print function for objects of class biplot
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reflect()
- Reflect the biplot about a chosen axis
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regress(<biplot>)
- Regression biplot
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regress()
- Regression biplot method
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rotate()
- Rotate the biplot a chosen amount of degrees
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samples()
- Format aesthetics for the biplot samples
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sqrtManhattan()
- Computes the square root of the Manhattan distance An example of a Euclidean embeddable distance metric
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summary(<biplot>)
- Generic summary function for objects of class biplot
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translate_axes()
- Translate biplot axes